Principal Ontologist - R&D DDSAI - Preclinical Sciences & Translational Safety

Johnson & Johnson 4 Locations Updated 29 October 2026
PharmaMedTechRegulatory AffairsQuality Assuranceemacroinform

Job description

At Johnson & Johnson, we believe health is everything. Our strength in healthcare innovation empowers us to build a world where complex diseases are prevented, treated, and cured, where treatments are smarter and less invasive, and solutions are personal. Through our expertise in Innovative Medicine and MedTech, we are uniquely positioned to innovate across the full spectrum of healthcare solutions today to deliver the breakthroughs of tomorrow, and profoundly impact health for humanity. Learn more at jnj.com As guided by Our Credo, Johnson & Johnson is responsible to our employees who work with us throughout the world. We provide an inclusive work environment where each person is considered as an individual. At Johnson & Johnson, we respect the diversity and dignity of our employees and recognize their merit. Job Function: Data Analytics & Computational Sciences Job Sub Function: Data Science Job Category: Scientific/Technology All Job Posting Locations: Beerse, Antwerp, Belgium, Cornellà de Llobregat, Barcelona, Spain, Madrid, Spain, Spring House, Pennsylvania, United States of America Job Description: We are seeking a Principal Scientist/Ontologist to join our R&D DDSAI team, dedicated to developing and supporting ontologies, controlled vocabularies, and semantic data standards for PSTS. This hands-on scientific and technical role will establish consistent terminology across PSTS projects, translate scientific knowledge into reusable semantic models, and strengthen connections between PSTS and other departments across the R&D pipeline. Working closely with scientific subject matter experts, data scientists, data engineers, and technology partners, you will help make scientific data easier to find, understand, integrate, and reuse. The successful candidate combines expertise in ontology engineering with an understanding of pharmaceutical research and a collaborative approach to solving complex scientific data challenges. Key Responsibilities Ontology Creation & Terminology Standardization Design, develop, test, and maintain ontology modules and controlled vocabularies supporting PSTS scientific workflows, including toxicology, safety assessment, pharmacokinetics/pharmacodynamics, and translational research. Partner with PSTS scientists to capture scientific concepts, definitions, relationships, and experimental context, translating these into well-structured semantic models. Harmonize terminology across projects, studies, assays, and data sources while preserving scientifically meaningful distinctions. Develop mappings between project-specific terminology, shared R&D ontologies, and relevant external standards, prioritizing reuse over unnecessary duplication. Project Support & Adoption Serve as a primary ontology and terminology resource for PSTS project teams, supporting requirements gathering, semantic annotation, data mapping, and issue resolution. Partner with data engineers and platform teams to incorporate ontology terms and mappings into data products, metadata systems, and scientific workflows. Provide practical documentation, examples, and training that help scientists and technical teams adopt standardized terminology. Maintain a prioritized backlog of ontology enhancements and support requests aligned with PSTS scientific needs. Cross-R&D Interoperability Collaborate with peer ontologists and scientific data teams across discovery, development, therapeutic areas, and other R&D functions. Establish shared definitions that connect PSTS evidence with upstream discovery and downstream development data. Identify opportunities to reuse ontology components and improve cross-study and cross-functional data integration. Governance, Quality & Lifecycle Management Apply modeling guidelines, naming conventions, persistent identifiers, version control, change management, and release practices. Maintain traceable definitions, mappings, provenance, and documentation of modeling decisions. Assess the impact of ontology changes on consuming projects and coordinate updates with scientific and technical stakeholders. Analytics & AI Readiness Help ensure PSTS datasets retain the scientific context needed for reliable interpretation and reuse. Evaluate approaches to terminology extraction and mapping automation, with appropriate scientific review. Qualifications Required Master’s degree or Ph.D. in Biomedical Informatics, Bioinformatics, Life Sciences, Engineering, or a related discipline. Hands-on experience developing and maintaining ontologies, controlled vocabularies, semantic models, or knowledge graphs for scientific or biomedical applications. Experience with ontology development tools (e.g., Protégé, OWL/RDF) version control, and scripting for data transformation and validation. Ability to translate scientific requirements into clear, reusable semantic structures. Strong communication, problem-solving, and stakeholder engagement skills. Ability to manage multiple workstreams and deliver practical solutions in a matrixed environment. Preferred Experience with pharmaceutical R&D data, particularly toxicology, safety sciences, ADME/DMPK, pathology, or translational research. Familiarity with relevant biomedical ontologies and regulatory data standards, including CDISC/SEND. Experience integrating semantic models into data pipelines, metadata catalogs, or knowledge graph platforms. Understanding of FAIR data principles, provenance, reproducibility, and quality-governed scientific environments. Experience facilitating cross-functional agreement on terminology and supporting adoption of shared standards. Experience leveraging open-source biomedical ontologies (e.g., GO, BAO) to support harmonization, annotation, integration, and reuse of bioassay and experimental data across discovery and development workflows. Why This Role Matters You will help turn fragmented scientific terminology into a shared, reusable foundation for PSTS research. Your work will strengthen scientific data connections across the R&D pipeline, improve evidence reuse, and enable more effective analytics and AI-supported research. Johnson & Johnson is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, age, national origin, disability, protected veteran status or other characteristics protected by federal, state or local law. We actively seek qualified candidates who are protected veterans and individuals with disabilities as defined under VEVRAA and Section 503 of the Rehabilitation Act. <span style="color:#494949"

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